[Imgcif-l] Draft of cif_img_1.4.dic
Herbert J. Bernstein yaya at bernstein-plus-sons.comTue Jul 4 22:34:13 BST 2006
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The current best draft of the next proposed imgCIF dictionary is posted for comments at: http://arcib.dowling.edu/~bernsteh/software/CBF/doc/cif_img_1.4_4Jul06_draft.html and http://arcib.dowling.edu/~bernsteh/software/CBF/doc/cif_img_1.4_4Jul06_draft.dic If you have trouble with the long URL, first go to: http://arcib.dowling.edu/~bernsteh/software/CBF/doc/ and then click on cif_img_1.4_4Jul06_draft.html or cif_img_1.4_4Jul06_draft.dic Comments, corrections and suggestions would be greatly appreciated. You should not base production software on this dictionary until it has been properly reviewed and accepted by the community and approved by COMCIFS. This is the beginning of a 45 day comment period that will end on Friday, 18 August 2006. Please send your comments to this list (imgcif-l at iucr.org) or to me by email. We can discuss as much as we have on hand at the imgCIF workshop (WK.02) at the 2006 ACA summer meeting in Hawaii on 22 July 2006. If major changes are needed, we can always start another comment period. When we achieve a draft that has community support with only minor revisions, it will be forwarded to COMCIFS. The cumulative changes in this draft are summarized below. Regards, Herbert J. Bernstein The changes from the last official release (1.3.2) are as follows: 1.4 2005-07-04 ; This is a change to reintegrate all changes made in the course of publication of ITVG, by the RCSB from April 2005 through August 2008 and changes for the 2006 imgCIF workshop in Hawaii. 2006-07-04 Consolidated changes for the 2006 imgCIF workshop (edited by HJB) + Correct type of '_array_structure_list.direction' from 'int' to 'code'. + Added new data items suggested by CN '_diffrn_data_frame.details' '_array_intensities.pixel_fast_bin_size', '_array_intensities.pixel_slow_bin_size and '_array_intensities.pixel_binning_method + Added deprecated item for completeness '_diffrn_frame_data.details' + Added entry for missing item in contents list '_array_structure_list_axis.displacement' + Added new MIME type X-BASE32K based on work by VL, KM, GD, HJB + Correct description of MIME boundary delimiter to start in column 1. + General cleanup of text fields to conform to changes for ITVG by removing empty lines at start and finish of text field. + Amend example for ARRAY_INTENSITIES to include binning. + Add local copy of type specification (as 'code') for all children of '_diffrn.id'. + For consistency, change all references to 'pi' to '\p' and all references to 'Angstroms' to '\%Angstroms'. + Clean up all powers to use IUCr convention of '^power^', as in '10^3^' for '10**3'. + Update 'yyyy-mm-dd' type regex to allow truncation from the right and improve comments to explain handling of related mmCIF 'yyyy-mm-dd:hh:mm' type, and use of 'Z' for GMT time zone. 2005-03-08 and 2004-08-08 fixed cases where _item_units.code used instead of _item_type.code (JDW) 2004-04-15 fixed item ordering in _diffrn_measurement_axis.measurement_id added sub_category 'vector' (JDW) ; -- ===================================================== Herbert J. Bernstein, Professor of Computer Science Dowling College, Kramer Science Center, KSC 121 Idle Hour Blvd, Oakdale, NY, 11769 Office: +1-631-244-3035 Lab (KSC 020): +1-631-244-3451 yaya at dowling.edu =====================================================
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