[SA_scat] RNA SAXS programs: calculate Rg, P(r)

Thiyagarajan, Pappannan thiyaga at anl.gov
Mon Jun 21 18:23:25 BST 2004



CRYSOL calculates the P(R) function using the atomic coordinates and FTs
to produce I(Q) data. It also provides Rg from the P(R) data. You can go
to the website http://www.iucr.org/iucr-top/comm/csas/ and look for
useful links for software. 


P. Thiyagarajan, Ph.D.
Senior Physicist, IPNS- 360, Room C-237
Argonne National Laboratory
9700 S. Cass Avenue
Argonne, Il 60439
1-630-252-4163 (FAX)

For information on IPNS please see www.pns.anl.gov



From: sa_scat-bounces at iucr.org [mailto:sa_scat-bounces at iucr.org] On
Behalf Of Tobin Sosnick
Sent: Monday, June 21, 2004 2:39 PM
To: sa_scat at iucr.org
Subject: [SA_scat] RNA SAXS programs: calculate Rg, P(r)



Any one know of programs to calculate Rg and P(r) curves from a
PDB-style file of an RNA structure?

Thank you.

Tobin R. Sosnick, Associate Professor
Dept. of Biochemistry & Molecular Biology (773) 834-0657 (office) 
Institute for Biophysical Dynamics (773) 702-0439 (fax) 
University of Chicago, CLSC Room 439 
920 E. 58th Street, Chicago, IL 60637 
trsosnic at midway.uchicago.edu  http://sosnick.uchicago.edu/ 
"Life is Signal-to-Noise"

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