[SA_scat] RNA SAXS programs: calculate Rg, P(r)
Tobin Sosnick trsosnic at midway.uchicago.eduSat Jul 3 23:19:04 BST 2004
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Dear Cristiano Oliveira: Thank you for the information. Many programs can analyze proteins, but only a few can deal with RNAs (amino acids versus nucleotides). Fortunately, I found one which can do what I needed. Sincerely, Tobin Sosnick At 01:46 PM 7/2/2004 -0300, you wrote: >Hello Tobin, > > The program hydropro from Dr. de La torre from University of Murcia / >Spain, > >http://leonardo.fcu.um.es/macromol/programs/hydropro/hydropro.htm > >calculates hydrodinamic parameters, Rg and P(r) direcly from PDB file. > > Best Regards, > Cristiano Oliveira > >********************************************************* >Cristiano Oliveira >phD student >Laboratorio de Cristalografia Aplicada e Raios-X >IFGW - Unicamp / Campinas - Brazil >55-19-37885498 >********************************************************* > > >On Mon, 21 Jun 2004, Tobin Sosnick wrote: > > > Hello: > > > > Any one know of programs to calculate Rg and P(r) curves from a PDB-style > > file of an RNA structure? > > > > Thank you. > > > > ************************************************************************** > > Tobin R. Sosnick, Associate Professor > > Dept. of Biochemistry & Molecular Biology (773) 834-0657 (office) > > Institute for Biophysical Dynamics (773) 702-0439 (fax) > > University of Chicago, CLSC Room 439 > > 920 E. 58th Street, Chicago, IL 60637 > > trsosnic at midway.uchicago.edu http://sosnick.uchicago.edu/ > > "Life is Signal-to-Noise" > > ************************************************************************* > > > >_______________________________________________ >sa_scat mailing list >sa_scat at iucr.org >http://scripts.iucr.org/mailman/listinfo/sa_scat ****************************************************** Tobin R. Sosnick, Associate Professor Dept. of Biochemistry & Molecular Biology Institute for Biophysical Dynamics University of Chicago (773) 834-0657 (office) CLSC Room 439 (773) 702-0439 (fax) 920 E. 58th Street Chicago, IL 60637 trsosnic at midway.uchicago.edu <http://sosnick.uchicago.edu/>http://sosnick.uchicago.edu/ ******************************************************* -------------- next part -------------- An HTML attachment was scrubbed... URL: http://scripts.iucr.org/pipermail/sa_scat/attachments/20040703/a6dc5743/attachment.htm
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